References

Aloni Y., Delmer D.P., and Benziman M. 1982. Achievement of high rates of in vitro synthesis of 1, 4-beta-D-glucan: activation by cooperative interaction of the Acetobacter xylinum enzyme system with GTP, polyethylene glycol, and a protein factor. Proc Natl Acad Sci USA 79(21):6448-6452. Amikam D. and Benziman M. 1989. Cyclic diguanylic acid and cellulose synthesis in Agrobacterium tumefaciens. J Bacteriol 171(12):6649-6655. Amikam D. and Galperin M.Y. 2006. PilZ domain is part of the bacterial c-di-GMP binding protein.

Bioinformatics 22(1):3-6. Archibald J.M., Rogers M.B., Toop M., Ishida K., and Keeling P. 2003. Lateral gene transfer and the evolution of plastid targeted proteins in the secondary plastid-containing alga Bigelowiella natans. PNAS 100(13):7678-7683. Ausmees N., Mayer R., Weinhouse H., Volman G., Amikam D., Benziman M., and Lindberg M. 2001. Genetic data indicate that proteins containing the GGDEF domain possess diguanylate cyclase activity. FEMS Microbiol Lett 204:163-167.

Benziman M., Haigler C.H., Brown, Jr. R.M., White A.R., and Cooper K.M. 1980. Cellulose biogenesis: polymerization and crystallization are coupled processes in Acetobacter xylinum. PNAS USA 77:6678-6682.

Blanton R.L., Fuller D., Iranfar N., Grimson M.J., and Loomis W.F. 2000. The cellulose synthase gene of Dictyostelium. Proc Natl Acad Sci USA 97:2391-2396.

Brahamsha B. and Haselkorn R. 1992. Identification of multiple RNA polymerase sigma factor homologs in the cyanobacterium Anabaena sp. strain PCC 7120: cloning, expression, and inactiva-tion of the sigB and sigC genes. J Bacteriol 173(8):2442-50.

Brett C.T. 2000. Cellulose microfibrils in plants: biosynthesis, deposition, and integration into the cell wall. Int Rev Cytol 199:161-99.

Brown, Jr. R.M. 1985. Cellulose microfibril assembly and orientation: recent developments. J Cell Sci Suppl 2:13-32.

Brown, Jr. R.M., Franke W.W., Kleinig H., Falk H., and Sitte P. 1969. A cellulosic wall component produced by the golgi apparatus. Science 166:894-896.

Brown, Jr. R.M. 1996. The biosynthesis of cellulose. Pure Appl Chem 10:1345-1373.

Brown, Jr. R.M. and Montezinos D. 1976. Cellulose microfibrils: visualization of biosynthetic and orienting complexes in association with the plasma membrane. Proc Natl Acad Sci USA 73:143-147.

Brown, Jr. R.M., Willison J.H.M., and Richardson C.L. 1976. Cellulose biosynthesis in Acetobacter xylinum: 1. Visualization of the site of synthesis and direct measurement of the in vivo process. Proc Natl Acad Sci USA 73(12):4565-4569.

Dehal P., Satou Y., Campbell R.K., Chapman J., Degnan B., De Tomaso A., Davidson B., Di Gregorio A., Gelpke M., Goodstein D.M., Harafuji N., Hastings K.E., Ho I., Hotta K., Huang W., Kawashima T., Lemaire P., Martinez D., Meinertzhagen I.A., Necula S., Nonaka M., Putnam N., Rash S., Saiga H., Satake M., Terry A., Yamada L., Wang H.G., Awazu S., Azumi K., Boore J., Branno M., Chin-Bow S., DeSantis R., Doyle S., Francino P., Keys D.N., Haga S., Hayashi

H., Hino K., Imai K.S., Inaba K., Kano S., Kobayashi K., Kobayashi M., Lee B.I., Makabe K.W., Manohar C., Matassi G., Medina M., Mochizuki Y., Mount S., Morishita T., Miura S., Nakayama A., Nishizaka S., Nomoto H., Ohta F., Oishi K., Rigoutsos I., Sano M., Sasaki A., Sasakura Y., Shoguchi E., Shin-i T., Spagnuolo A., Stainier D., Suzuki M.M., Tassy O., Takatori N., Tokuoka M., Yagi K., Yoshizaki F., Wada S., Zhang C., Hyatt P.D., Larimer F., Detter C., Doggett N., Glavina T., Hawkins T., Richardson P., Lucas S., Kohara Y., Levine M., Satoh N., and Rokhsar D.S. 2003. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298:2157-2167.

Deinema M.H. and Zevenhuizen L.P. 1971. Formation of cellulose fibrils by gram-negative bacteria and their role in bacterial flocculation. Arch Mikrobiol 78(1):42-51.

Delmer D.P. 1999. Cellulose biosynthesis: exciting times for a difficult field of study. Annu Rev Plant Phys Plant Mol Biol 50:245-276.

Doolittle W. 1998. You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet 14:307-311.

García B., Latasa C., Solano C., García-del Portillo F., Gamazo C., and Lasa I. 2004. Role of the GGDEF protein family in Salmonella cellulose biosynthesis and biofilm formation. Mol Microbiol 54(1):264-277.

Giddings J.R. TH, Brower D.L., and Staehelin L.A. 1980. Visualization of particle complexes in the plasma membrane of Micrasterias denticulata associated with the formation of cellulose fibrils in primary and secondary cell walls. J Cell Biol 84 (2):327-339.

González V., Bustos P., Ramirez-Romero M.A., Medrano-Soto A., Salgado H., Hernandez-Gonzalez

I., Hernandez-Celis J.C., Quintero V., Moreno-Hagelsieb G., Girard L., Rodriguez O., Flores M., Cevallos M.A., Collado-Vides J., Romero D., and Davila G. 2003. The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments. Genome Biol 4(6):R36.

Grimson M.J., Haigler C.H., and Blanton RL. 1996. Cellulose microfibrils, cell motility, and plasma membrane protein organization change in parallel during culmination in Dictyostelium discoideum. J Cell Sci 109 (Pt 13):3079-3087.

Guerrero G., Peralta H., Aguilar A., Diaz R., Villalobos M.A., Medrano-Soto A. and Mora J. 2005. Evolutionary, structural and functional relationships revealed by comparative analysis of syntenic genes in Rhizobiales. BMC Evol Biol 5:55.

Hotchkiss A.T. and Brown, Jr. R.M., 1988. Evolution of the cellulosic cell wall in the Charophyceae. In: Schuerch C. (ed.) Cellulose and Wood - Chemistry and Technology. . Wiley, New York, pp. 591-609.

Huang C.Y., Ayliffe M.A., and Timmis J.N. 2003. Direct measurement of the transfer rate of chlo-roplast DNA into the nucleus. Nature 422:72-76.

Kimura S., Chen H.P., Saxena I.M., Brown, Jr. R.M., and Itoh T. 2001a. Localization of c-di-GMP-binding protein with the linear terminal complexes of Acetobacter xylinum. J Bacteriol 183(19):5668-74.

Kimura S., Ohshima C., Hirose E., Nishikawa J., and Itoh T. 2001b. Cellulose in the house of the appendicularian Oikopleura rufescens. Protoplasma 216(1-2):71-74.

Korbel J.O., Jensen L.J., von Mering C., and Bork P. 2004. Analysis of genomic context: prediction of functional associations from conserved bidirectionally transcribed gene pairs. Nat Biotechnol 22(7):911-917.

Linder M., Winiecka-Krusnell J., and Linder E. 2002. Use of recombinant cellulose-binding domains of Trichoderma reesei cellulase as a selective immunocytochemical marker for cellulose in protozoa. Appl Environ Microbiol.

Marchler-Bauer A., Anderson J.B., Cherukuri P.F., DeWeese-Scott C., Geer L.Y., Gwadz M., He S., Hurwitz D.I., Jackson J.D., Ke Z., Lanczycki C.J., Liebert C.A., Liu C., Lu F., Marchler G.H., Mullokandov M., Shoemaker B.A., Simonyan V., Song J.S., Thiessen P.A., Yamashita R.A., Yin J.J., Zhang D., and Bryant S.H. 2005. CDD: a Conserved Domain Database for protein classification. Nucleic Acids Res 33:D192-D196.

Martin W., Rujan T., Richly E., Hansen A., Cornelsen S., Lins T., Leister D., Stoebe B., Hasegawa M., and Penny D. 2002. Evolutionary anaylsis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. PNAS 99(19):12246-12251.

Matthysse A.G., Deschet K., Williams M., Marry M., White A.R., and Smith W.C. 2004. A functional cellulose synthase from ascidian epidermis. Proc Natl Acad Sci USA 101(4):986-991.

Matthysse A.G., Marry M., Krall L., Kaye M., Ramey B.E., Fuqua C., and White A.R. 2005. The effect of cellulose overproduction on binding and biofilm formation on roots by Agrobacterium tumefaciens. Mol Plant Microbe Interact 18(9):1002-1010.

Matthysse A.G., Thomas D.L., and White A.R. 1995a. Mechanism of cellulose synthesis in Agrobacterium tumefaciens. J Bacteriol 177(4):1076-1081.

Matthysse A.G., White S., and Lightfoot R. 1995b. Genes required for cellulose synthesis in Agrobacterium tumefaciens. J Bacteriol 177(4):1069-1075.

Mayer R., Ross P., Weinhouse H., Amikam D., Volman G., Ohana P., Calhoon R.D., Wong H.C., Emerick A.W., and Benziman M. 1991. Polypeptide composition of bacterial cyclic diguanylic acid-dependent cellulose synthase and the occurrence of immunologically crossreacting proteins in higher plants. Proc Natl Acad Sci USA 88(12):5472-5476.

Mueller S.C. and Brown, Jr. R.M. 1980. Evidence for an intramembrane componentassociated with a cellulose microfibril synthesizing complex in higher plants. J Cell Biol 84:315-326.

Muhlethaler K. 1949. The structure of bacterial cellulose. Biochim Biophys Acta 3:527-535.

Nakashima K., Yamanda L., Satou Y., Azuma J., and Satoh N. 2004. The evolutionary origin of animal cellulose synthase. Dev Genes Evol 214(2):81-88.

Napoli C., Dazzo F., and Hubbell D. 1975. Production of cellulose microfibrils by Rhizobium. Appl Microbiol 30(1):123-31.

Nobles D.R., Jr. and Brown, Jr. R.M., Jr. 2004. The pivotal role of cyanobacteria in the evolution of cellulose synthases and cellulose synthase-like proteins. Cellulose 11:437-448.

Nobles D.R., Romanovicz D.K., and Brown, Jr. R.M., Jr. 2001. Cellulose in cyanobacteria. Origin of vascular plant cellulose synthase? Plant Physiol 127(2):529-542.

Okuda K.O., Sekida S., Yoshinaga S. and Suetomo Y. 2004. Cellulose synthesizing complexes in some chromophyte algae. Cellulose 11:365-376.

Olsen G.J., Woese C.R., and Overbeek R. 1994. The winds of (evolutionary) change: breathing new life into microbiology. J Bacteriol 176:1-6.

Preston R.D. 1974. Cellulose. In: The Physical Biology of Plant Cell Walls. Chapman & Hall, London, pp. 444-456.

Richmond T. 2000. Higher plant cellulose synthases. Genome Biology 1(4): reviews 3001.1-3001.6.

Roberts A.W. and Roberts E.M. 2004. Cellulose synthase (CesA) genes in algae and seedless plants. Cellulose 11:419-435.

Roberts E. 1991. Biosynthesis of cellulose II and related carbohydrates. PhD thesis. The Univeristy of Texas at Austin, Austin.

Roelofsen P.A. 1958. Cell wall structure as related to surface growth. Acta Botanica Neerlandica 7:77-89.

Rômling U. (2002). Molecular biology of cellulose production in bacteria. Res Microbiol 153:205-212.

Ross P., Aloni Y., Weinhouse H., Michaeli D., Weinberger-Ohana P., Mayer R., and Benziman M. 1986. Control of cellulose synthesis in Acetobacter xylinum: a unique guanyl ologonucleotide is the immediate activator of the cellulose synthase. Carbohydrate Res 149:101-117.

Ross P., Mayer R., and Benziman M. 1991. Cellulose biosynthesis and function in bacteria. Microbiol Rev 55:35-58.

Saxena I.M. and Brown, Jr. R.M., 2005. Cellulose biosynthesis: current views and evolving concepts. Ann Bot (Lond) 96(1):9-21.

Saxena I.M., Brown, Jr. R.M., and Dandekar T. 2001. Structure-function characterization of cellulose synthase: relationship to other glycosyltransferases. Phytochemistry 57:1135-1148.

Saxena I.M., Brown, Jr. R.M., Fevre M., Geremia R., and Henrissat B. 1995. Multidomain architecture of beta-glycosyl transferases: implications for mechanism of action. J Bacteriol 177:1419-24.

Saxena I.M., Kudlicka K., Okuda K., and Brown, Jr. R.M. 1994. Characterization of genes in the cellulose synthesizing operon (acs operon) of Acetobacter xylinum: implications for cellulose crystallization. J Bacteriol 176:5735-5752.

SchuBler A., Hirn S. and Katsaros C. 2003. Cellulose synthesizing terminal complexes and morphogenesis in tip-growing of Syringodermaphinneyi (Phaeophyceae). Phycol Res 51:35-44.

Silver R.P., Prior K., Nsahlai C., and Wright L.F. 2001. ABC transporters and the export of capsular polysaccharides from gram-negative bacteria. Res Microbiol 152(3-4):357-364.

Spiers J., Kahn G., Bohannon J., Travisano M. and Rainey P.B. 2002. Adaptive divergence in experimental populations of Pseudomonas fluorescens. I. Genetic and phenotypic bases of wrinkly spreader fitness. Genetics 161:33-46.

Stragier P. and Losick R. 1996. Molecular genetics of sporulation in Bacillus subtilis. Annu Rev Genet 30:297-341.

Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., Raasch C., Liesegang H., and Broughton W.J. 2004. An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234. J Bacteriol 186(2):535-542.

Tsekos I. 1999. The sites of cellulose synthesis in algae: diversity and evolution of cellulose-synthesizing enzyme complexes. J Phycol 35:625-655.

Yamada M. and Miyazaki T. 1976. Ultrastructure and chemical analysis of the cell wall of Pythium debaryanum. Jpn J Microbiol 20(2):83-91.

Yu Z.G., Zhou L.Q., Anh V.V., Chu K.H., Long S.C., and Deng J.Q. 2005. Phylogeny of prokaryotes and chloroplasts revealed by a simple composition approach on all protein sequences from complete genomes without sequence alignment. J Mol Evol 60(4):538-545.

Yudkin M.D. and Clarkson J. 2005. Differential gene expression in genetically identical sister cells: the initiation of sporulation in Bacillus subtilis. Mol Microbiol 56(3):578-589.

Zaar K. 1979. Visualization of pores (export sites) correlated with cellulose production in the envelope of the gram-negative bacterium Acetobacter xylinum.J Cell Biol 80(3):773-777.

Zogaj X., Bokranz W., Nimtz M., and Romling U. 2003. Production of cellulose and curli fimbrieae by members of the family Enterobacteriaceae isolated from the human gastrointestinal tract. Infect Immun 71(7):4151-4158.

Zogaj X., Nimtz M., Rohde M., Bokranz W., and Romling U. 2001. The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix. Mol Microbiol 39:1452-1463.

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